Areum Han
From Variome
Areum Han
My ultimate research goal is to find beautiful integration of medical and molecular information. It will allow people to know about their health conditions more exactly when they have genomic sequences and physiological data.about clinical bioinformatics
Biostatement | Bioinformatics related writings|Bioterms|Notes|BioArt
Personal Info
Date of Birth : Jan 21, 1980
Nationality : Korean
Gender : Female
Address : 945 Weyburn Terrace APT#310, Los Angeles, California 90024
Contact : arhan_at_ucla.edu
Current Affliation : PhD student, Biomedical Engineering Dept., University of California, Los Angeles
(Biomedical Signal/Image Processing and Bioinformatics)
Courseworks
Year/Quater Course
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2006/Fall Introduction to Biomedical Engineering(C201)
2006/Fall Basic Human Biology for Biomedical Engineers I(CM202)
2007/Winter Basic Human Biology for Biomedical Engineers II(CM203)
2007/Winter Statistical Methods in Computational Biology(M271)
2007/Spring Computational Genetics(CM224)
2007/Summer Biochemistry: Introduction to Structure, Enzymes, and Metabolism(CHEM153A)
2007/Summer Introduction to Molecular Biology(LS3)
2007/Fall Advanced Principles of Molecular and Cellular Biosciences I(CM253)
2007/Fall Molecular Biotechnology for Engineers(CM245)
2008/Winter Advanced Principles of Molecular and Cellular Biosciences II(CM267A)
2008/Winter Cell Biology Discussion(CM267B)
2008/Winter Current Topics in Computer Science(CS279)
Education
MS. February 2005
Korea Advance Institute of Science and Technology – Republic of Korea Master of Science in Bioinformatics of BioSystems
Thesis subject: Inferring transcriptional regulations from temporal properties of gene expression
Supervisor: Prof. Kwang Hyung Lee and Doheon Lee
BS. August 2002
Kyung Hee University – Republic of Korea August 2002
Bachelor of Science in Biomedical Engineering
Minor: Computer Science
Supervisor: Prof. Seung Hoon Park
Techinical Experimence and Employment
Graduate student researcher
Sep. 2006 - current
UCLA, U.S.A
- Study about trans and cis regulatory network of splicing events
Supervisor: Prof. Douglas L. Black
http://www.mimg.ucla.edu/faculty/black/index.html
Researcher
Feb. 2005 - Aug.2006
National Genome Information Center, KRIBB, South Korea
- Develop mining system of candidate genes, single nucleotide polymorphisms for stroke association studies.
- Analyze Korean Hap Map data.
- Mapping Human SNPs to proteins and protein domains.
Supervisor: Dr. Jong Bhak.
http://www.kobic.re.kr/kobic/index.php
Research Assistant
Mar. 2003 –Feb. 2005
Bio Information System Laboratory, KAIST, South Korea
- Analyze scale-free network characteristics of gene expression and design measures for time series gene expression data. Supervisor: Prof. H. K. Lee and Prof. D. H. Lee
Visiting Researcher
Jan. 2004 -May 2004
Computational Biology, UC Berkeley, U.S.A
- Participate in biostatistics and sequence analysis classes and research focused on gene expression data
Intern Researcher
Sept. 2001 –Feb. 2002
Medical Application Team, Samsung Advanced Institute of Technology
- Develop hierarchical knowledge database about human electromagnetic characteristics.
Supervisor: Dr. Gilwon Yoon.
Research student
Aug. 2000 –Aug. 2001
Medical Information Laboratory, Kyung Hee University
- Develop Sports Prescription System Using Smart Card and XML.
Supervisor: Prof. S.H. Park.
Publications
2007
Areum Han*, Woo-Yeon Kim*, and Sungmin Park, “SNP2NMD: A database of human SNPs causing NMD(nonsense-mediated mRNA decay)”, Bioinformatics, 2007, 23 (3):397-399 http://bioinformatics.oxfordjournals.org/cgi/reprint/btl593v1
2006
Areum Han, Hyo Jin Kang, Yoobok Cho, Sunghoon Lee, Young Joo Kim, and Sungsam Gong, “SNP@Domain: a web resource of Single Nucleotide Polymorphisms (SNPs) within protein domain and sequences”, Nucleic Acids Research, 2006, 34:W642-W644 http://nar.oxfordjournals.org/cgi/content/full/34/suppl_2/W642
Hyojin Kang, Taehui Hong, Won-Hyong Chung, Younguk Kim, Jinhee Jung, Sohyun Hwang, Areum Han, and Young Joo Kim, “D2GSNP:a web server for the selection of Single Nucleotide Polymorphisms within human disease genes”, Genomics & Informatics, 2006, 4 (1):45~47 http://www.kogo.or.kr/bulletin/UploadFile/rapidcom_1_200603.pdf
Lim J., Kim Y.J., Yoon Y., Kim S.O., Kang H., Park J., A Reum Han., Han B., Oh B., Kim K., Yoon B., and Song K., “Comparative study of the linkage disequilibrium of an ENCODE region, chromosome 7p15, in Korean, Japanese, and Han Chinese samples”, Genomics, 2006; 87 (3):392-398. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=16376517
2005
Areum Han et al., “Extraction of developmentally important genes from micro array data”, Journal of Advanced Computational Intelligence and Intelligent Informatics, 2005, 9(3).
*Selected paper from The International Symposium on Advanced Intelligent Systems.
2001
Areum Han et al.,”Medical information system using smart card and XML”, Proc. the Korea Society of Medical and Biological Engineering, 2001.
Poster presentation
2006
Areum Han, Sungsam Gong,and Jong Bhak "Identification of Disease related Single Nucleotide Polymorphisms (SNPs) within Human Protein Domains". RECOMB Satellite Conferences on Systems Biology and Computational Proteomics, University of California, San Diego. December
